BOLD - ID
  Cytochrome Oxidae Subunit 1 [COX1]   Internal Transcribed Spacer Region [ITS]  

The BOLD Identification System (IDS) for ITS is the default identification tool for Fungal barcodes and accepts sequences from the Internal Transcribed Spacer Region
and  returns a species-level identification when possible. Further validation with independent genetic markers will be desirable in some forensic applications.

The BLAST algorithm is employed in place of the interal identification engine for ITS sequences.

There are very few ITS records on BOLD so most queries will likely not return a successful match.


Search Database:
ITS Sequences
Every ITS barcode record on BOLD with a minimum sequence length of 100bp (warning: unvalidated database and includes records without species level identification). This includes many species represented by only one or two specimens as well as all species with interim taxonomy. This searchonly returns a list of the nearest matches and does not provide a probability of placement to a taxon.

Enter sequences in fasta format: